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Developmental Regulation of Genes Encoding Universal Stress Proteins in Schistosoma mansoni

机译:曼氏血吸虫中普遍应激蛋白编码基因的发育调控

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摘要

The draft nuclear genome sequence of the snail-transmitted, dimorphic, parasitic, platyhelminth Schistosoma mansoni revealed eight genes encoding proteins that contain the Universal Stress Protein (USP) domain. Schistosoma mansoni is a causative agent of human schistosomiasis, a severe and debilitating Neglected Tropical Disease (NTD) of poverty, which is endemic in at least 76 countries. The availability of the genome sequences of Schistosoma species presents opportunities for bioinformatics and genomics analyses of associated gene families that could be targets for understanding schistosomiasis ecology, intervention, prevention and control. Proteins with the USP domain are known to provide bacteria, archaea, fungi, protists and plants with the ability to respond to diverse environmental stresses. In this research investigation, the functional annotations of the USP genes and predicted nucleotide and protein sequences were initially verified. Subsequently, sequence clusters and distinctive features of the sequences were determined. A total of twelve ligand binding sites were predicted based on alignment to the ATP-binding universal stress protein from Methanocaldococcus jannaschii. In addition, six USP sequences showed the presence of ATP-binding motif residues indicating that they may be regulated by ATP. Public domain gene expression data and RT-PCR assays confirmed that all the S. mansoni USP genes were transcribed in at least one of the developmental life cycle stages of the helminth. Six of these genes were up-regulated in the miracidium, a free-swimming stage that is critical for transmission to the snail intermediate host. It is possible that during the intra-snail stages, S. mansoni gene transcripts for universal stress proteins are low abundant and are induced to perform specialized functions triggered by environmental stressors such as oxidative stress due to hydrogen peroxide that is present in the snail hemocytes. This report serves to catalyze the formation of a network of researchers to understand the function and regulation of the universal stress proteins encoded in genomes of schistosomes and their snail intermediate hosts.
机译:蜗牛传播的,双态的,寄生的,蠕虫的曼氏血吸虫的核基因组序列草案揭示了八个编码含有通用应激蛋白(USP)结构域蛋白的基因。曼氏血吸虫是人类血吸虫病的病原体,人类血吸虫病是一种严重的,使人衰弱的被忽视的热带病,在至少76个国家中流行。血吸虫物种基因组序列的可获得性为相关基因家族的生物信息学和基因组学分析提供了机会,这可能是了解血吸虫病生态,干预,预防和控制的目标。已知具有USP结构域的蛋白质可为细菌,古细菌,真菌,原生生物和植物提供应对多种环境胁迫的能力。在这项研究调查中,USP基因的功能注释以及预测的核苷酸和蛋白质序列已得到初步验证。随后,确定序列簇和序列的独特特征。基于与詹氏甲烷球菌的ATP结合通用应激蛋白的比对,预测了总共十二个配体结合位点。另外,六个USP序列显示ATP结合基序残基的存在,表明它们可能受ATP调节。公共领域的基因表达数据和RT-PCR分析证实,所有曼氏链球菌USP基因均在蠕虫的发育生命周期至少一个阶段被转录。这些基因中的六个在海acid中上调,这是自由游动阶段,对于向蜗牛中间宿主的传播至关重要。可能在蜗牛内阶段,普遍胁迫蛋白的曼氏沙门氏菌基因转录物的丰度低,并被诱导执行由环境应激物触发的特定功能,例如由于蜗牛血细胞中存在的过氧化氢引起的氧化应激。该报告旨在促进研究人员网络的形成,以了解血吸虫及其蜗牛中间宿主基因组中编码的普遍应激蛋白的功能和调控。

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